An example dataset from TUNEL on a pancreas.

The output of running TUNEL on a pancreas slide.

pancreas

Format

a tibble (67031 x 12)

cell_id

a unique ID for each cell.

x

x location

y

y location

dapi

DAPI channel intensity

fitc

FITC channel intensity

area

area of cell

major_axis_length

length of the cell's longest dimension

minor_axis_length

length of the cell's shortest dimension

eccentricity

how circular the cell is

solidity

how solid the cell is

extent

unknown

orientation

angle of the cell